高等学校化学学报 ›› 2015, Vol. 36 ›› Issue (12): 2394.doi: 10.7503/cjcu20150367

• 分析化学 • 上一篇    下一篇

光谱法结合分子对接法研究1-羟基芘与过氧化氢酶的相互作用

陈霖锋1, 张静1, 朱亚先2, 张勇1,3()   

  1. 1. 近海海洋环境科学国家重点实验室(厦门大学), 厦门大学环境与生态学院, 厦门 361102
    2. 厦门大学化学化工学院化学系, 厦门361005
    3. 漳州职业技术学院食品与生物工程系, 漳州 363000
  • 收稿日期:2015-05-08 出版日期:2015-12-10 发布日期:2015-10-09
  • 作者简介:联系人简介: 张 勇, 男, 博士, 教授, 博士生导师, 主要从事环境化学研究. E-mail:yzhang@xmu.edu.cn
  • 基金资助:
    国家自然科学基金(批准号: 21075102, 21177102)和中央高校基本科研业务费专项资金(批准号: 2013121052)资助

Molecular Interactions of 1-Hydroxypyrene with Catalase Revealed by Spectroscopic Methods Combined with Molecular Docking

CHEN Linfeng1, ZHANG Jing1, ZHU Yaxian2, ZHANG Yong1,3,*()   

  1. 1. State Key Laboratory of Marine Environmental Sciences of China(Xiamen University),College of Environment and Ecology, Xiamen University, Xiamen 361102, China
    2. College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
    3. Department of Food and Biological Engineering, Zhangzhou Institute of Technology, Zhangzhou 363000, China
  • Received:2015-05-08 Online:2015-12-10 Published:2015-10-09
  • Contact: ZHANG Yong E-mail:yzhang@xmu.edu.cn
  • Supported by:
    † Supported by the National Natural Science Foundation of China(Nos.21075102, 21177102) and the Fundamental Research Funds for the Central Universities of China(No.2013121052)

摘要:

利用荧光光谱、 紫外-可见吸收光谱法结合分子对接法, 研究了水溶液中1-羟基芘(1-OHP)与过氧化氢酶(CAT)的相互作用. 结果表明, 1-OHP对CAT的内源荧光有较强的猝灭作用, 且静态猝灭是引起CAT荧光猝灭的主要原因. 1-OHP能与CAT形成1:1复合物, 在290 K下其结合常数为2.96×105 L/mol. 热力学分析结果表明, 1-OHP与CAT结合的作用力主要为氢键和范德华力. 根据Förster的非辐射能量转移理论计算得二者结合距离为3.48 nm. 同步荧光和紫外-可见吸收光谱结果表明, 1-OHP-CAT复合物的形成可使CAT构象发生变化, 且高浓度的1-OHP对CAT的活性有明显的抑制作用. 利用分子对接法预测了1-OHP在CAT上的最优结合位点和详细的结合信息, 所得结果与实验相符.

关键词: 1-羟基芘, 过氧化氢酶, 光谱法, 分子对接, 构象变化

Abstract:

The interactions between 1-hydroxypyrene(1-OHP) and catalase(CAT) were investigated by fluorescence, UV visible absorption(UV-Vis) spectra and molecular docking methods in aqueous solutions. The experimental results showed that the intrinsic fluorescence of CAT was quenched by the addition of 1-OHP through a static quenching mechanism. 1-OHP can bind with CAT to form 1:1 complex, with a binding constant of 2.96×105 L/mol at 290 K. The result of thermodynamic analysis indicated that hydrogen bonds and van der Waals’ force were the dominant intermolecular forces in stabilizing the complex. Based on the Förster’s non-radiation energy transfer theory, the binding distance between 1-OHP and CAT was determined to be 3.48 nm. The synchronous fluorescence and UV-Vis absorption spectral results showed that the formation of 1-OHP-CAT complex can induce some conformation changes of CAT. And in the presence of high concentrations of 1-OHP, the CAT activity can be inhibited obviously. Molecular docking was further employed to seek the optimum binding site of 1-OHP in CAT, and get the detailed binding information, which is identical to the experiment results. This work contributes to understand the interaction mechanism between 1-OHP and CAT at the molecular level, and provides important insights to study the toxicity mechanism of PAHs and their metabolites on antioxidant enzyme system in organisms.

Key words: 1-Hydroxypyrene, Catalase, Spectroscopic method, Molecular docking, Conformation change

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