Chem. J. Chinese Universities

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NMR Study of Influences of D51N Mutation on Backbone Conformation of Hyperthermophilic Archaeal [P62A]Ssh10b

LUO Quan1,2, FANG Xian-Yang1, DENG Zhi-Wei2, WANG Jin-Feng1*   

    1. National Laboratory of Biomacromolecules, Research Center of Molecular Biology, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China;
    2. Analysis and Testing Center, Beijing Normal University, Beijing 100875, China
  • Received:2007-06-05 Revised:1900-01-01 Online:2008-03-10 Published:2008-03-10
  • Contact: WANG Jin-Feng

Abstract: The P62A mutant hyperthermophilic archaeal protein Ssh10b, [P62A]Ssh10b, is highly thermostable. The structure determination shows that a salt-bridge K48—D51 is formed in helix α2, and mutation of D51 can influence the thermostability of protein. In order to understand the effect of mutation on the stability of protein, we constructed the D51N-mutant [P62A]Ssh10b plasmid, and obtained the 15N and 13C double-labeled [D51N/P62A]Ssh10b protein with a high purity. The experimental data of triple-resonance NMR experiments provided nearly complete backbone resonance assignments. Comparing the main chain 1HN and 15N chemical shifts for [P62A]Ssh10b with its mutant variant and analyzing the chemical shift differences on the basis of [P62A] Ssh10b structure, it was found that D51N mutation influenced the backbone conformation of helix α2. The further effect was observed in the structural region consisting of Loop Lβ2α2, the N-terminal of strand β4, and the C-terminal of loop Lβ3β4, and in the region around loop Lβ3β4 as well. This revealed that D51N mutation disrupted the salt bridge of K48—D51 on helix α2 and influenced not only the backbone conformation of helix α2 but also the local conformations of other structural regions in the protein. Therefore, the high thermostability of [P62A]Ssh10b may be correlated closely to its tertiary conformation.

Key words: D51N mutant, [D51N/P62A]Ssh10b, NMR, Backbone resonance assignment, Chemical shift comparison

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