Chem. J. Chinese Universities ›› 2023, Vol. 44 ›› Issue (3): 20220335.doi: 10.7503/cjcu20220335
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ZHANG Kaisong, WANG Shaoru, ZHANG Yutong, TIAN Tian()
Received:
2022-05-13
Online:
2023-03-10
Published:
2023-03-14
Contact:
TIAN Tian
E-mail:ttian@whu.edu.cn
Supported by:
CLC Number:
TrendMD:
ZHANG Kaisong, WANG Shaoru, ZHANG Yutong, TIAN Tian. Study of Epigenetic Modifications of Nucleic Acids Based on Supramolecular Chemistry[J]. Chem. J. Chinese Universities, 2023, 44(3): 20220335.
1 | Cantara W. A., Crain P. F., Rozenski J., McCloskey J. A., Harris K. A., Zhang X. N., Vendeix F. A. P., Fabris D., Agris P. F., Nucleic Acids Res., 2011, 39, D195—D201 |
2 | Herdewijn P., Modified Nucleosides: In Biochemistry, Biotechnology and Medicine, John Wiley & Sons, Weinheim, 2008 |
3 | Chen Y. Q., Hong T. T., Wang S. R., Mo J., Tian T., Zhou X., Chem. Soc. Rev., 2017, 46(10), 2844—2872 |
4 | Jaenisch R., Bird A., Nat. Genet., 2003, 33, 245—254 |
5 | Dai Y., Yuan B. F., Feng Y. Q., RSC Chem. Biol., 2021, 2(4), 1096—1114 |
6 | Sood A. J., Viner C., Hoffman M. M., J. Cheminform., 2019, 11, 30 |
7 | Heyn H., Esteller M., Cell, 2015, 161(4), 710—713 |
8 | Kallen R. G., Simon M., Marmur J., J. Mol. Biol., 1962, 5, 248—250 |
9 | Pfaffeneder T., Spada F., Wagner M., Brandmayr C., Laube S. K., Eisen D., Truss M., Steinbacher J., Hackner B., Kotljarova O., Schuermann D., Michalakis S., Kosmatchev O., Schiesser S., Steigenberger B., Raddaoui N., Kashiwazaki G., Muller U., Spruijt C. G., Vermeulen M., Leonhardt H., Schar P., Muller M., Carell T., Nat. Chem. Biol., 2014, 10(7), 574—581 |
10 | Musheev M. U., Baumgartner A., Krebs L., Niehrs C., Nat. Chem. Biol., 2020, 16(6), 630—634 |
11 | Portela A., Esteller M., Nat. Biotechnol., 2010, 28(10), 1057—1568 |
12 | Goelz S. E., Vogelstein B., Hamilton S. R., Feinberg A. P., Science, 1985, 228(4696), 187—190 |
13 | Lehn J. M., Angew. Chem. Int. Ed. Engl., 1988, 27(1), 89—112 |
14 | Lehn J. M., Science, 1993, 260(5115), 1762—1763 |
15 | Zhou J., Li J., Du X. W., Xu B., Biomaterials, 2017, 129, 1—27 |
16 | Aldaye F. A., Sleiman H. F., Pure and Applied Chemistry, 2009, 81(12), 2157—2181 |
17 | McLaughlin C. K., Hamblin G. D., Sleiman H. F., Chem. Soc. Rev., 2011, 40(12), 5647—5656 |
18 | Wang S. R., Song Y. Y., Wei L., Liu C. X., Fu B. S., Wang J. Q., Yang X. R., Liu Y. N., Liu S. M., Tian T., Zhou X., J. Am. Chem. Soc., 2017, 139(46), 16903—16912 |
19 | Wagner M., Steinbacher J., KrausT. F. J., Michalakis S., Hackner B., Pfaffeneder T., Perera A., Muller M., Giese A., Kretzschmar H. A., Carell T., Angew. Chem. Int. Ed. Engl., 2015, 54(42), 12511—12514 |
20 | Bachman M., Uribe⁃Lewis S., Yang X. P., Burgess H. E., Iurlaro M., Reik W., Murrell A., Balasubramanian S., Nat. Chem. Biol., 2015, 11(8), 555—557 |
21 | Pfaffeneder T., Hackner B., Truss M., Munzel M., Muller M., Deiml C. A., Hagemeier C., Carell T., Angew. Chem. Int. Ed. Engl., 2011, 50(31), 7008—7012 |
22 | Song C. X., He C., Trends Biochem. Sci., 2013, 38(10), 480—484 |
23 | Kellinger M. W., Song C. X., Chong J., Lu X. Y., He C., Wang D., Nat. Struct. Mol. Biol., 2012, 19(8), 831—833 |
24 | Isaacs L., Acc. Chem. Res., 2014, 47(7), 2052—2062 |
25 | Murray J., Kim K., Ogoshi T., Yao W., Gibb B. C., Chem. Soc. Rev., 2017, 46(9), 2479—2496 |
26 | Liu S. M., Ruspic C., Mukhopadhyay P., Chakrabarti S., Zavalij P. Y., Isaacs L., J. Am. Chem. Soc., 2005, 127(45), 15959—15967 |
27 | Barrow S. J., Kasera S., Rowland M. J., del Barrio J., Scherman O. A., Chem. Rev., 2015, 115(22), 12320—12406 |
28 | Tonga G. Y., Jeong Y., Duncan B., Mizuhara T., Mout R., Das R., Kim S. T., Yeh Y. C., Yan B., Hou S., Rotello V. M., Nat. Chem., 2015, 7(7), 597—603 |
29 | Li Q. L., Sun Y., Sun Y. L., Wen J. J., Zhou Y., Bing Q. M., Isaacs L. D., Jin Y. H., Gao H., Yang Y. W., Chem. Mater., 2014, 26(22), 6418—6431 |
30 | Shetty D., Khedkar J. K., Park K. M., Kim K., Chem. Soc. Rev., 2015, 44(23), 8747—8761 |
31 | Cao L. P., Sekutor M., Zavalij P. Y., Mlinaric⁃Majerski K., Glaser R., Isaacs L., Angew. Chem. Int. Ed. Engl., 2014, 53(4), 988—993 |
32 | Liu K., Liu Y. L., Yao Y. X., Yuan H. X., Wang S., Wang Z. Q.,Zhang X., Angew. Chem. Int. Ed. Engl., 2013, 52(32), 8285—8289 |
33 | Lee D. W., Park K. M., Banerjee M., Ha S. H., Lee T., Suh K., Paul S., Jung H., Kim J., Selvapalam N., Ryu S. H., Kim K., Nat. Chem., 2011, 3(2), 154—159 |
34 | Bhasikuttan A. C., Mohanty J., Nau W. M., Pal H., Angew. Chem. Int. Ed. Engl., 2007, 46(22), 4120—4122 |
35 | Wang S. R., Wang J. Q., Fu B. S., Chen K., Xiong W., Wei L., Qing G. Y., Tian T., Zhou X., J. Am. Chem. Soc., 2018, 140(46), 15842—15849 |
36 | Ji S. F., Fu I., Naldiga S., Shao H. Z., Basu A. K., Broyde S., Tretyakova N. Y., Nucleic Acids Res., 2018, 46(13), 6455—6469 |
37 | Li F. C., Zhang Y. Q., Bai J., Greenberg M. M., Xi Z., Zhou C. Z., J. Am. Chem. Soc., 2017, 139(31), 10617—10620 |
38 | Zeng T., Liu L., Li T., Li Y. R., Gao J., Zhao Y. L., Wu H. C., Chem. Sci., 2015, 6(10), 5628—5634 |
39 | Esteller M., Oncogene, 2002, 21(35), 5427—5440 |
40 | Branco M. R., Ficz G., Reik W., Nat. Rev. Genet., 2012, 13(1), 7—13 |
41 | Clarke J., Wu H. C., Jayasinghe L., Patel A., Reid S., Bayley H., Nat. Nanotechnol., 2009, 4(4), 265—270 |
42 | Liu L., Li Y. R., Li T., Xie J. I., Chen C. F., Liu Q. S., Zhang S. W., Wu H. C., Anal. Chem., 2016, 88(2), 1073—1077 |
43 | Hsu G. W., Ober M., Carell T., Beese L. S., Nature, 2004, 431(7005), 217—221 |
44 | Loft S., Danielsen P., Lohr M., Jantzen K., Hemmingsen J. G., Roursgaard M., Karotki D. G., Moller P., Arch. Biochem. Biophys., 2012, 518(2), 142—150 |
45 | Gao D. M., Chen J. H., Fang S., Ma T., Qiu X. H., Ma J. G., Gu Q. F., Cheng P., Matter, 2021, 4(3), 1001—1016 |
46 | Wu T. P., Wang T., Seetin M. G., Lai Y. Q., Zhu S. J., Lin K. X., Liu Y. F., Byrum S. D., Mackintosh S. G., Zhong M., Tackett A., Wang G. L., Hon L. S., Fang G., Swenberg J. A., Xiao A. Z., Nature, 2016, 532(7599), 329—333 |
47 | Xiao C. L., Zhu S., He M. H., Chen D., Zhang Q., Chen Y., Yu G. L., Liu J. B., Xie S. Q., Luo F., Liang Z., Wang D. P., Bo X. C., Gu X. F., Wang K.,Yan G. R., Mol. Cell, 2018, 71(2), 306—318 |
48 | Yang H. M., Ren J., Zhao M., Chen C., Wang F., Chen Z. L., Bioelectrochemistry, 2022, 146, 108111 |
49 | Adampourezare M., Saadati A., Hasanzadeh M., Dehghan G., Feizi M. H., J. Mol. Recognit., 2022, 35(2), e2945 |
50 | Irrera S., Ruiz⁃Hernandez S. E., Reggente M., Passeri D., Natali M., Gala F., Zollo G., Rossi M., Portalone G., Applied Surface Science, 2017, 407, 297—306 |
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